Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP67_RS08885 | Genome accession | NZ_CP148195 |
| Coordinates | 1683862..1684164 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0074 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1678862..1689164
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP67_RS08850 (WHP67_08850) | - | 1679275..1680036 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| WHP67_RS08855 (WHP67_08855) | - | 1680033..1680719 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP67_RS08860 (WHP67_08860) | thiD | 1680716..1681528 (+) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP67_RS08865 (WHP67_08865) | thiE | 1681518..1682150 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP67_RS08870 (WHP67_08870) | hemD | 1682128..1682757 (+) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| WHP67_RS08875 (WHP67_08875) | - | 1682754..1683206 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP67_RS08880 (WHP67_08880) | - | 1683203..1683865 (-) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP67_RS08885 (WHP67_08885) | ctsT | 1683862..1684164 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP67_RS08890 (WHP67_08890) | proC | 1684161..1684892 (-) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP67_RS08895 (WHP67_08895) | fliW | 1684892..1685281 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP67_RS08900 (WHP67_08900) | - | 1685442..1686089 (+) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP67_RS08905 (WHP67_08905) | lon | 1686106..1688481 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP67_RS08910 (WHP67_08910) | rpsR | 1688541..1688801 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952568 WHP67_RS08885 WP_002853046.1 1683862..1684164(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0074]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952568 WHP67_RS08885 WP_002853046.1 1683862..1684164(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0074]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |