Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ29_RS05340 | Genome accession | NZ_CP148190 |
| Coordinates | 1032611..1032913 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0080 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1027611..1037913
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ29_RS05305 (WHQ29_05305) | - | 1028024..1028785 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| WHQ29_RS05310 (WHQ29_05310) | - | 1028782..1029468 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ29_RS05315 (WHQ29_05315) | thiD | 1029465..1030277 (+) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ29_RS05320 (WHQ29_05320) | thiE | 1030267..1030899 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ29_RS05325 (WHQ29_05325) | hemD | 1030877..1031506 (+) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| WHQ29_RS05330 (WHQ29_05330) | - | 1031503..1031955 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ29_RS05335 (WHQ29_05335) | - | 1031952..1032614 (-) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHQ29_RS05340 (WHQ29_05340) | ctsT | 1032611..1032913 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ29_RS05345 (WHQ29_05345) | proC | 1032910..1033641 (-) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ29_RS05350 (WHQ29_05350) | fliW | 1033641..1034030 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ29_RS05355 (WHQ29_05355) | - | 1034191..1034838 (+) | 648 | WP_052823130.1 | outer membrane protein assembly factor BamD | - |
| WHQ29_RS05360 (WHQ29_05360) | lon | 1034855..1037230 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ29_RS05365 (WHQ29_05365) | rpsR | 1037290..1037550 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952482 WHQ29_RS05340 WP_002853046.1 1032611..1032913(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0080]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952482 WHQ29_RS05340 WP_002853046.1 1032611..1032913(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0080]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |