Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP72_RS05880 | Genome accession | NZ_CP148184 |
| Coordinates | 1113066..1113368 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0088 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1108066..1118368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP72_RS05855 (WHP72_05855) | rpsR | 1108429..1108689 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP72_RS05860 (WHP72_05860) | lon | 1108749..1111124 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP72_RS05865 (WHP72_05865) | - | 1111141..1111788 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| WHP72_RS05870 (WHP72_05870) | fliW | 1111949..1112338 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP72_RS05875 (WHP72_05875) | proC | 1112338..1113069 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP72_RS05880 (WHP72_05880) | ctsT | 1113066..1113368 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP72_RS05885 (WHP72_05885) | - | 1113365..1114028 (+) | 664 | Protein_1139 | hypothetical protein | - |
| WHP72_RS05890 (WHP72_05890) | - | 1114025..1114477 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP72_RS05895 (WHP72_05895) | hemD | 1114474..1115103 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| WHP72_RS05900 (WHP72_05900) | thiE | 1115081..1115713 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP72_RS05905 (WHP72_05905) | thiD | 1115703..1116515 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP72_RS05910 (WHP72_05910) | - | 1116512..1117198 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP72_RS05915 (WHP72_05915) | - | 1117195..1117956 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952418 WHP72_RS05880 WP_002853046.1 1113066..1113368(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0088]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952418 WHP72_RS05880 WP_002853046.1 1113066..1113368(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0088]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |