Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP84_RS03245 | Genome accession | NZ_CP148181 |
| Coordinates | 623651..623953 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0101 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 618651..628953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP84_RS03220 (WHP84_03220) | rpsR | 619014..619274 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP84_RS03225 (WHP84_03225) | lon | 619334..621709 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP84_RS03230 (WHP84_03230) | - | 621726..622373 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP84_RS03235 (WHP84_03235) | fliW | 622534..622923 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP84_RS03240 (WHP84_03240) | proC | 622923..623654 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP84_RS03245 (WHP84_03245) | ctsT | 623651..623953 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP84_RS03250 (WHP84_03250) | - | 623950..624612 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP84_RS03255 (WHP84_03255) | - | 624609..625061 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP84_RS03260 (WHP84_03260) | hemD | 625058..625687 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP84_RS03265 (WHP84_03265) | thiE | 625665..626297 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP84_RS03270 (WHP84_03270) | thiD | 626287..627099 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP84_RS03275 (WHP84_03275) | - | 627096..627782 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP84_RS03280 (WHP84_03280) | - | 627779..628540 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952329 WHP84_RS03245 WP_002853046.1 623651..623953(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0101]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952329 WHP84_RS03245 WP_002853046.1 623651..623953(+) (ctsT) [Campylobacter jejuni strain Z1323CCJ0101]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |