Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | WHP62_RS05695 | Genome accession | NZ_CP148177 |
| Coordinates | 1093376..1094335 (+) | Length | 319 a.a. |
| NCBI ID | WP_002852903.1 | Uniprot ID | A0A5Y6P8U5 |
| Organism | Campylobacter jejuni strain Z1323HCJ0012 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1088376..1099335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP62_RS05665 (WHP62_05665) | neuC | 1088967..1090091 (+) | 1125 | WP_002859249.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| WHP62_RS05670 (WHP62_05670) | - | 1090084..1091031 (+) | 948 | WP_002896736.1 | glycosyltransferase | - |
| WHP62_RS05675 (WHP62_05675) | - | 1091028..1091693 (+) | 666 | WP_228567890.1 | acylneuraminate cytidylyltransferase family protein | - |
| WHP62_RS05680 (WHP62_05680) | - | 1091681..1092127 (+) | 447 | WP_002852791.1 | hypothetical protein | - |
| WHP62_RS05685 (WHP62_05685) | - | 1092172..1092513 (+) | 342 | WP_002852868.1 | hypothetical protein | - |
| WHP62_RS05690 (WHP62_05690) | - | 1092505..1093317 (-) | 813 | WP_002852816.1 | glycosyltransferase family 2 protein | - |
| WHP62_RS05695 (WHP62_05695) | waaF | 1093376..1094335 (+) | 960 | WP_002852903.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| WHP62_RS05700 (WHP62_05700) | gmhA | 1094316..1094876 (-) | 561 | WP_002852775.1 | D-sedoheptulose 7-phosphate isomerase | - |
| WHP62_RS05705 (WHP62_05705) | rfaE1 | 1094873..1096258 (-) | 1386 | WP_002852777.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| WHP62_RS05710 (WHP62_05710) | rfaD | 1096251..1097204 (-) | 954 | WP_002852832.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| WHP62_RS05715 (WHP62_05715) | gmhB | 1097205..1097765 (-) | 561 | WP_002878815.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| WHP62_RS05720 (WHP62_05720) | - | 1097847..1098149 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| WHP62_RS05725 (WHP62_05725) | ccoS | 1098172..1098378 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36766.44 Da Isoelectric Point: 10.4054
>NTDB_id=952308 WHP62_RS05695 WP_002852903.1 1093376..1094335(+) (waaF) [Campylobacter jejuni strain Z1323HCJ0012]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=952308 WHP62_RS05695 WP_002852903.1 1093376..1094335(+) (waaF) [Campylobacter jejuni strain Z1323HCJ0012]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.984 |
100 |
0.95 |