Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP62_RS05345 | Genome accession | NZ_CP148177 |
| Coordinates | 1024286..1024588 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0012 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1019286..1029588
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP62_RS05320 (WHP62_05320) | rpsR | 1019649..1019909 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP62_RS05325 (WHP62_05325) | lon | 1019969..1022344 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP62_RS05330 (WHP62_05330) | - | 1022361..1023008 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP62_RS05335 (WHP62_05335) | fliW | 1023169..1023558 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP62_RS05340 (WHP62_05340) | proC | 1023558..1024289 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP62_RS05345 (WHP62_05345) | ctsT | 1024286..1024588 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP62_RS05350 (WHP62_05350) | - | 1024585..1025247 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP62_RS05355 (WHP62_05355) | - | 1025244..1025696 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP62_RS05360 (WHP62_05360) | hemD | 1025693..1026322 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP62_RS05365 (WHP62_05365) | thiE | 1026300..1026932 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP62_RS05370 (WHP62_05370) | thiD | 1026922..1027734 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP62_RS05375 (WHP62_05375) | - | 1027731..1028417 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP62_RS05380 (WHP62_05380) | - | 1028414..1029175 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952306 WHP62_RS05345 WP_002853046.1 1024286..1024588(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0012]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952306 WHP62_RS05345 WP_002853046.1 1024286..1024588(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0012]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |