Detailed information NTG0952255

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: ACH6FF_RS05880
• Genome accession: NZ_CP172356
• Coordinates: 1129027..1129986 (+)
• Length: 319 a.a.
• NCBI ID: WP_002852903.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain YH025
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1124027..1134986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH6FF_RS05855 (ACH6FF_05855)	neuB	1124526..1125566 (+)	1041	WP_002924069.1	N-acetylneuraminate synthase	-
ACH6FF_RS05860 (ACH6FF_05860)	neuC	1125563..1126681 (+)	1119	WP_052796579.1	UDP-N-acetylglucosamine 2-epimerase	-
ACH6FF_RS05865 (ACH6FF_05865)	-	1126678..1127343 (+)	666	WP_002878820.1	cytidylyltransferase domain-containing protein	-
ACH6FF_RS05870 (ACH6FF_05870)	-	1127331..1128164 (+)	834	WP_002878819.1	CatB-related O-acetyltransferase	-
ACH6FF_RS05875 (ACH6FF_05875)	waaV	1128156..1128968 (-)	813	WP_002878817.1	glycosyltransferase family 2 protein	-
ACH6FF_RS05880 (ACH6FF_05880)	waaF	1129027..1129986 (+)	960	WP_002852903.1	lipopolysaccharide heptosyltransferase II	Regulator
ACH6FF_RS05885 (ACH6FF_05885)	gmhA	1129967..1130527 (-)	561	WP_002852775.1	D-sedoheptulose 7-phosphate isomerase	-
ACH6FF_RS05890 (ACH6FF_05890)	rfaE1	1130524..1131909 (-)	1386	WP_002852777.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
ACH6FF_RS05895 (ACH6FF_05895)	rfaD	1131902..1132855 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
ACH6FF_RS05900 (ACH6FF_05900)	gmhB	1132856..1133416 (-)	561	WP_002924071.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
ACH6FF_RS05905 (ACH6FF_05905)	-	1133497..1133799 (+)	303	WP_002852762.1	cytochrome c	-
ACH6FF_RS05910 (ACH6FF_05910)	ccoS	1133822..1134028 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36766.44 Da
• Isoelectric Point: 10.4054

>NTDB_id=952255 ACH6FF_RS05880 WP_002852903.1 1129027..1129986(+) (waaF) [Campylobacter jejuni strain YH025]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=952255 ACH6FF_RS05880 WP_002852903.1 1129027..1129986(+) (waaF) [Campylobacter jejuni strain YH025]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95