Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ23_RS05625 | Genome accession | NZ_CP148174 |
| Coordinates | 1061956..1062258 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0019 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1056956..1067258
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ23_RS05600 (WHQ23_05600) | rpsR | 1057319..1057579 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ23_RS05605 (WHQ23_05605) | lon | 1057639..1060014 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHQ23_RS05610 (WHQ23_05610) | - | 1060031..1060678 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ23_RS05615 (WHQ23_05615) | fliW | 1060839..1061228 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ23_RS05620 (WHQ23_05620) | proC | 1061228..1061959 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ23_RS05625 (WHQ23_05625) | ctsT | 1061956..1062258 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ23_RS05630 (WHQ23_05630) | - | 1062255..1062917 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHQ23_RS05635 (WHQ23_05635) | - | 1062914..1063366 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ23_RS05640 (WHQ23_05640) | hemD | 1063363..1063992 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHQ23_RS05645 (WHQ23_05645) | thiE | 1063970..1064602 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ23_RS05650 (WHQ23_05650) | thiD | 1064592..1065404 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ23_RS05655 (WHQ23_05655) | - | 1065401..1066087 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ23_RS05660 (WHQ23_05660) | - | 1066084..1066845 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952225 WHQ23_RS05625 WP_002853046.1 1061956..1062258(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0019]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952225 WHQ23_RS05625 WP_002853046.1 1061956..1062258(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0019]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |