Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ31_RS05215 | Genome accession | NZ_CP148168 |
| Coordinates | 1006410..1006712 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain Z1323HCJ0028 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1001410..1011712
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ31_RS05190 (WHQ31_05190) | rpsR | 1001773..1002033 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ31_RS05195 (WHQ31_05195) | lon | 1002093..1004468 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ31_RS05200 (WHQ31_05200) | - | 1004485..1005132 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ31_RS05205 (WHQ31_05205) | fliW | 1005293..1005682 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ31_RS05210 (WHQ31_05210) | proC | 1005682..1006413 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ31_RS05215 (WHQ31_05215) | ctsT | 1006410..1006712 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| WHQ31_RS05220 (WHQ31_05220) | - | 1006709..1007371 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| WHQ31_RS05225 (WHQ31_05225) | - | 1007368..1007820 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| WHQ31_RS05230 (WHQ31_05230) | hemD | 1007817..1008446 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| WHQ31_RS05235 (WHQ31_05235) | thiE | 1008424..1009056 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| WHQ31_RS05240 (WHQ31_05240) | thiD | 1009046..1009858 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ31_RS05245 (WHQ31_05245) | - | 1009855..1010541 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| WHQ31_RS05250 (WHQ31_05250) | - | 1010538..1011299 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=952117 WHQ31_RS05215 WP_002855822.1 1006410..1006712(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0028]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952117 WHQ31_RS05215 WP_002855822.1 1006410..1006712(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0028]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |