Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ32_RS04900 | Genome accession | NZ_CP148161 |
| Coordinates | 916398..916700 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0040 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 911398..921700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ32_RS04875 (WHQ32_04875) | rpsR | 911761..912021 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ32_RS04880 (WHQ32_04880) | lon | 912081..914456 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHQ32_RS04885 (WHQ32_04885) | - | 914473..915120 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ32_RS04890 (WHQ32_04890) | fliW | 915281..915670 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ32_RS04895 (WHQ32_04895) | proC | 915670..916401 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ32_RS04900 (WHQ32_04900) | ctsT | 916398..916700 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ32_RS04905 (WHQ32_04905) | - | 916697..917359 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHQ32_RS04910 (WHQ32_04910) | - | 917356..917808 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ32_RS04915 (WHQ32_04915) | hemD | 917805..918434 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHQ32_RS04920 (WHQ32_04920) | thiE | 918412..919044 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ32_RS04925 (WHQ32_04925) | thiD | 919034..919846 (-) | 813 | WP_338847080.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ32_RS04930 (WHQ32_04930) | - | 919843..920529 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ32_RS04935 (WHQ32_04935) | - | 920526..921287 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952007 WHQ32_RS04900 WP_002853046.1 916398..916700(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0040]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952007 WHQ32_RS04900 WP_002853046.1 916398..916700(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0040]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |