Detailed information NTG0951983

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP33_RS05810
• Genome accession: NZ_CP148160
• Coordinates: 1110767..1111717 (+)
• Length: 316 a.a.
• NCBI ID: WP_002899461.1
• Uniprot ID: A0A5Z1S6J2
• Organism: Campylobacter jejuni strain Z1323HCJ0047
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1105767..1116717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP33_RS05795 (WHP33_05795)	-	1106615..1108546 (-)	1932	WP_052785346.1	hypothetical protein	-
WHP33_RS05800 (WHP33_05800)	-	1108622..1109896 (+)	1275	WP_052785345.1	DUF2972 domain-containing protein	-
WHP33_RS05805 (WHP33_05805)	-	1109860..1110708 (-)	849	WP_002899460.1	glycosyltransferase family 2 protein	-
WHP33_RS05810 (WHP33_05810)	waaF	1110767..1111717 (+)	951	WP_002899461.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP33_RS05815 (WHP33_05815)	-	1111703..1112467 (-)	765	WP_002899462.1	glycosyltransferase family 25 protein	-
WHP33_RS05820 (WHP33_05820)	gmhA	1112467..1113027 (-)	561	WP_002881439.1	D-sedoheptulose 7-phosphate isomerase	-
WHP33_RS05825 (WHP33_05825)	rfaE1	1113024..1114409 (-)	1386	WP_052785344.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP33_RS05830 (WHP33_05830)	rfaD	1114402..1115355 (-)	954	WP_038813706.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP33_RS05835 (WHP33_05835)	gmhB	1115356..1115916 (-)	561	WP_052794772.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP33_RS05840 (WHP33_05840)	-	1115998..1116300 (+)	303	WP_002852762.1	cytochrome c	-
WHP33_RS05845 (WHP33_05845)	ccoS	1116323..1116529 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36265.84 Da
• Isoelectric Point: 10.2322

>NTDB_id=951983 WHP33_RS05810 WP_002899461.1 1110767..1111717(+) (waaF) [Campylobacter jejuni strain Z1323HCJ0047]
MKIFIHLPTWLGDAVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=951983 WHP33_RS05810 WP_002899461.1 1110767..1111717(+) (waaF) [Campylobacter jejuni strain Z1323HCJ0047]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCACGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGTTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGATAGT
GGCCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAACGAAAATGCAAAATTAGTACATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: A0A5Z1S6J2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.541	99.367	0.949