Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP33_RS05490 | Genome accession | NZ_CP148160 |
| Coordinates | 1045377..1045679 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain Z1323HCJ0047 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1040377..1050679
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP33_RS05465 (WHP33_05465) | rpsR | 1040740..1041000 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP33_RS05470 (WHP33_05470) | lon | 1041060..1043435 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP33_RS05475 (WHP33_05475) | - | 1043452..1044099 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP33_RS05480 (WHP33_05480) | fliW | 1044260..1044649 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP33_RS05485 (WHP33_05485) | proC | 1044649..1045380 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP33_RS05490 (WHP33_05490) | ctsT | 1045377..1045679 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| WHP33_RS05495 (WHP33_05495) | - | 1045676..1046338 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| WHP33_RS05500 (WHP33_05500) | - | 1046335..1046787 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| WHP33_RS05505 (WHP33_05505) | hemD | 1046784..1047413 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| WHP33_RS05510 (WHP33_05510) | thiE | 1047391..1048023 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| WHP33_RS05515 (WHP33_05515) | thiD | 1048013..1048825 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP33_RS05520 (WHP33_05520) | - | 1048822..1049508 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| WHP33_RS05525 (WHP33_05525) | - | 1049505..1050266 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=951981 WHP33_RS05490 WP_002855822.1 1045377..1045679(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0047]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=951981 WHP33_RS05490 WP_002855822.1 1045377..1045679(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0047]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |