Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ48_RS05335 | Genome accession | NZ_CP148159 |
| Coordinates | 1021410..1021712 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0049 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1016410..1026712
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ48_RS05310 (WHQ48_05310) | rpsR | 1016773..1017033 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHQ48_RS05315 (WHQ48_05315) | lon | 1017093..1019468 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHQ48_RS05320 (WHQ48_05320) | - | 1019485..1020132 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHQ48_RS05325 (WHQ48_05325) | fliW | 1020293..1020682 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ48_RS05330 (WHQ48_05330) | proC | 1020682..1021413 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ48_RS05335 (WHQ48_05335) | ctsT | 1021410..1021712 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ48_RS05340 (WHQ48_05340) | - | 1021709..1022371 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHQ48_RS05345 (WHQ48_05345) | - | 1022368..1022820 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ48_RS05350 (WHQ48_05350) | hemD | 1022817..1023446 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHQ48_RS05355 (WHQ48_05355) | thiE | 1023424..1024056 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ48_RS05360 (WHQ48_05360) | thiD | 1024046..1024858 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ48_RS05365 (WHQ48_05365) | - | 1024855..1025541 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ48_RS05370 (WHQ48_05370) | - | 1025538..1026299 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=951954 WHQ48_RS05335 WP_002853046.1 1021410..1021712(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0049]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=951954 WHQ48_RS05335 WP_002853046.1 1021410..1021712(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0049]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |