Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP51_RS05350 | Genome accession | NZ_CP148156 |
| Coordinates | 1027213..1027515 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0066 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1022213..1032515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP51_RS05325 (WHP51_05325) | rpsR | 1022576..1022836 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP51_RS05330 (WHP51_05330) | lon | 1022896..1025271 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP51_RS05335 (WHP51_05335) | - | 1025288..1025935 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP51_RS05340 (WHP51_05340) | fliW | 1026096..1026485 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP51_RS05345 (WHP51_05345) | proC | 1026485..1027216 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP51_RS05350 (WHP51_05350) | ctsT | 1027213..1027515 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP51_RS05355 (WHP51_05355) | - | 1027512..1028174 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP51_RS05360 (WHP51_05360) | - | 1028171..1028623 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP51_RS05365 (WHP51_05365) | hemD | 1028620..1029249 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP51_RS05370 (WHP51_05370) | thiE | 1029227..1029859 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP51_RS05375 (WHP51_05375) | thiD | 1029849..1030661 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP51_RS05380 (WHP51_05380) | - | 1030658..1031344 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP51_RS05385 (WHP51_05385) | - | 1031341..1032102 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=951899 WHP51_RS05350 WP_002853046.1 1027213..1027515(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0066]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=951899 WHP51_RS05350 WP_002853046.1 1027213..1027515(+) (ctsT) [Campylobacter jejuni strain Z1323HCJ0066]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |