Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ26_RS03310 | Genome accession | NZ_CP148155 |
| Coordinates | 651971..652273 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0069 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 646971..657273
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ26_RS03275 (WHQ26_03275) | - | 647384..648145 (+) | 762 | WP_002867190.1 | ATP-binding protein | - |
| WHQ26_RS03280 (WHQ26_03280) | - | 648142..648828 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ26_RS03285 (WHQ26_03285) | thiD | 648825..649637 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ26_RS03290 (WHQ26_03290) | thiE | 649627..650259 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ26_RS03295 (WHQ26_03295) | hemD | 650237..650866 (+) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| WHQ26_RS03300 (WHQ26_03300) | - | 650863..651315 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ26_RS03305 (WHQ26_03305) | - | 651312..651974 (-) | 663 | WP_146263321.1 | hypothetical protein | - |
| WHQ26_RS03310 (WHQ26_03310) | ctsT | 651971..652273 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ26_RS03315 (WHQ26_03315) | proC | 652270..653001 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ26_RS03320 (WHQ26_03320) | fliW | 653001..653390 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ26_RS03325 (WHQ26_03325) | - | 653551..654198 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| WHQ26_RS03330 (WHQ26_03330) | lon | 654215..656590 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ26_RS03335 (WHQ26_03335) | rpsR | 656650..656910 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=951877 WHQ26_RS03310 WP_002853046.1 651971..652273(-) (ctsT) [Campylobacter jejuni strain Z1323HCJ0069]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=951877 WHQ26_RS03310 WP_002853046.1 651971..652273(-) (ctsT) [Campylobacter jejuni strain Z1323HCJ0069]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |