Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP83_RS05225 | Genome accession | NZ_CP148154 |
| Coordinates | 1008246..1008548 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323HCJ0086 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1003246..1013548
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP83_RS05190 (WHP83_05190) | - | 1003659..1004420 (+) | 762 | WP_002867190.1 | ATP-binding protein | - |
| WHP83_RS05195 (WHP83_05195) | - | 1004417..1005103 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP83_RS05200 (WHP83_05200) | thiD | 1005100..1005912 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP83_RS05205 (WHP83_05205) | thiE | 1005902..1006534 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP83_RS05210 (WHP83_05210) | hemD | 1006512..1007141 (+) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| WHP83_RS05215 (WHP83_05215) | - | 1007138..1007590 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP83_RS05220 (WHP83_05220) | - | 1007587..1008249 (-) | 663 | WP_146263321.1 | hypothetical protein | - |
| WHP83_RS05225 (WHP83_05225) | ctsT | 1008246..1008548 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP83_RS05230 (WHP83_05230) | proC | 1008545..1009276 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP83_RS05235 (WHP83_05235) | fliW | 1009276..1009665 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP83_RS05240 (WHP83_05240) | - | 1009826..1010473 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| WHP83_RS05245 (WHP83_05245) | lon | 1010490..1012865 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHP83_RS05250 (WHP83_05250) | rpsR | 1012925..1013185 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=951853 WHP83_RS05225 WP_002853046.1 1008246..1008548(-) (ctsT) [Campylobacter jejuni strain Z1323HCJ0086]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=951853 WHP83_RS05225 WP_002853046.1 1008246..1008548(-) (ctsT) [Campylobacter jejuni strain Z1323HCJ0086]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |