Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   WHP77_RS07775 Genome accession   NZ_CP148153
Coordinates   1470280..1470717 (-) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain Z1323PCJ0002     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1465280..1475717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHP77_RS07760 (WHP77_07760) ispG 1465821..1466894 (-) 1074 WP_002852250.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
  WHP77_RS07765 (WHP77_07765) cipA 1467042..1468435 (+) 1394 Protein_1505 DUF2972 domain-containing protein -
  WHP77_RS07770 (WHP77_07770) priA 1468445..1470298 (-) 1854 WP_002852169.1 primosomal protein N' -
  WHP77_RS07775 (WHP77_07775) Cj0683 1470280..1470717 (-) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  WHP77_RS07780 (WHP77_07780) - 1470714..1470956 (-) 243 WP_002854947.1 hypothetical protein -
  WHP77_RS07785 (WHP77_07785) - 1470946..1471176 (-) 231 WP_002852327.1 hypothetical protein -
  WHP77_RS07790 (WHP77_07790) uvrB 1471330..1473303 (+) 1974 WP_002855027.1 excinuclease ABC subunit UvrB -
  WHP77_RS07795 (WHP77_07795) kdpD 1473405..1475225 (-) 1821 WP_338844404.1 DUF4118 domain-containing protein -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=951829 WHP77_RS07775 WP_002852324.1 1470280..1470717(-) (Cj0683) [Campylobacter jejuni strain Z1323PCJ0002]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=951829 WHP77_RS07775 WP_002852324.1 1470280..1470717(-) (Cj0683) [Campylobacter jejuni strain Z1323PCJ0002]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1