Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHP54_RS05355 | Genome accession | NZ_CP148149 |
| Coordinates | 1024544..1024846 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323PCJ0006 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1019544..1029846
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHP54_RS05330 (WHP54_05330) | rpsR | 1019907..1020167 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WHP54_RS05335 (WHP54_05335) | lon | 1020227..1022602 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| WHP54_RS05340 (WHP54_05340) | - | 1022619..1023266 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WHP54_RS05345 (WHP54_05345) | fliW | 1023427..1023816 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHP54_RS05350 (WHP54_05350) | proC | 1023816..1024547 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHP54_RS05355 (WHP54_05355) | ctsT | 1024544..1024846 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHP54_RS05360 (WHP54_05360) | - | 1024843..1025505 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WHP54_RS05365 (WHP54_05365) | - | 1025502..1025954 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHP54_RS05370 (WHP54_05370) | hemD | 1025951..1026580 (-) | 630 | WP_002852819.1 | uroporphyrinogen-III synthase | - |
| WHP54_RS05375 (WHP54_05375) | thiE | 1026558..1027190 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHP54_RS05380 (WHP54_05380) | thiD | 1027180..1027992 (-) | 813 | WP_338842138.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHP54_RS05385 (WHP54_05385) | - | 1027989..1028675 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHP54_RS05390 (WHP54_05390) | - | 1028672..1029433 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=951732 WHP54_RS05355 WP_002853046.1 1024544..1024846(+) (ctsT) [Campylobacter jejuni strain Z1323PCJ0006]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=951732 WHP54_RS05355 WP_002853046.1 1024544..1024846(+) (ctsT) [Campylobacter jejuni strain Z1323PCJ0006]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |