Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WHO18_RS04735 Genome accession   NZ_CP148128
Coordinates   925219..926013 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis isolate FELIX_MS620     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 920219..931013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO18_RS04705 sxzA 921058..922089 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  WHO18_RS04710 yfhB 922204..923085 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  WHO18_RS04715 yfhC 923173..923757 (+) 585 WP_003243940.1 nitroreductase -
  WHO18_RS04720 yfhD 923796..923987 (-) 192 WP_003233561.1 YfhD family protein -
  WHO18_RS04725 yfhE 924054..924164 (-) 111 WP_003223230.1 YfhE family protein -
  WHO18_RS04730 yfhF 924219..925130 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  WHO18_RS04735 recX 925219..926013 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  WHO18_RS04740 yfhH 926015..926329 (+) 315 WP_003244592.1 YfhH family protein -
  WHO18_RS04745 yfhI 926472..927665 (+) 1194 WP_003243500.1 MFS transporter -
  WHO18_RS04750 sspK 927698..927850 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WHO18_RS04755 yfhJ 927975..928244 (+) 270 WP_003243789.1 YfhJ family protein -
  WHO18_RS04760 yfhK 928389..928907 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WHO18_RS04765 spdL 928992..929324 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  WHO18_RS04770 ephM 929311..930171 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=951419 WHO18_RS04735 WP_003243354.1 925219..926013(+) (recX) [Bacillus subtilis isolate FELIX_MS620]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=951419 WHO18_RS04735 WP_003243354.1 925219..926013(+) (recX) [Bacillus subtilis isolate FELIX_MS620]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1