Detailed information NTG0951378

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACHP5D_RS15720
• Genome accession: NZ_CP172217
• Coordinates: 3084707..3085732 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GF4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3079707..3090732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHP5D_RS15695 (ACHP5D_15710)	metJ	3080144..3080461 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACHP5D_RS15700 (ACHP5D_15715)	yiiX	3080645..3081253 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ACHP5D_RS15705 (ACHP5D_15720)	-	3081260..3081883 (+)	624	WP_000720774.1	TIGR02117 family protein	-
ACHP5D_RS15710 (ACHP5D_15725)	rpmE	3081938..3082150 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACHP5D_RS15715 (ACHP5D_15730)	priA	3082353..3084551 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ACHP5D_RS15720 (ACHP5D_15735)	cytR	3084707..3085732 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACHP5D_RS15725 (ACHP5D_15740)	ftsN	3085824..3086783 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACHP5D_RS15730 (ACHP5D_15745)	hslV	3086876..3087406 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACHP5D_RS15735 (ACHP5D_15750)	hslU	3087416..3088747 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACHP5D_RS15740 (ACHP5D_15755)	menA	3088814..3089740 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACHP5D_RS15745 (ACHP5D_15760)	rraA	3089833..3090318 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACHP5D_RS15750 (ACHP5D_15765)	zapB	3090403..3090648 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=951378 ACHP5D_RS15720 WP_000644904.1 3084707..3085732(+) (cytR) [Escherichia coli strain GF4]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=951378 ACHP5D_RS15720 WP_000644904.1 3084707..3085732(+) (cytR) [Escherichia coli strain GF4]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628