Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHO38_RS07850 Genome accession   NZ_CP148124
Coordinates   1492524..1493099 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate FELIX_MS521     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1487524..1498099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO38_RS07820 dapD 1487710..1488420 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHO38_RS07825 dapI 1488490..1489614 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WHO38_RS07830 ykuS 1489676..1489921 (+) 246 WP_003232382.1 YkuS family protein -
  WHO38_RS07835 mscT 1489958..1490761 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WHO38_RS07840 ahpA 1490998..1491540 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WHO38_RS07845 ykuV 1491612..1492058 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WHO38_RS07850 rok 1492524..1493099 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WHO38_RS07855 cse15 1493140..1494105 (-) 966 WP_003245018.1 spore protein Cse15 -
  WHO38_RS07860 mobA 1494242..1494841 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WHO38_RS07865 moeB 1494892..1495911 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WHO38_RS07870 glp 1495929..1497221 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WHO38_RS07875 mobB 1497182..1497703 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=951305 WHO38_RS07850 WP_003232378.1 1492524..1493099(+) (rok) [Bacillus subtilis isolate FELIX_MS521]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=951305 WHO38_RS07850 WP_003232378.1 1492524..1493099(+) (rok) [Bacillus subtilis isolate FELIX_MS521]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1