Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHO38_RS07735 Genome accession   NZ_CP148124
Coordinates   1473297..1473761 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate FELIX_MS521     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1468297..1478761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO38_RS07715 kinA 1468763..1470583 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  WHO38_RS07720 dapX 1470594..1471775 (-) 1182 WP_003232415.1 aminotransferase A -
  WHO38_RS07725 - 1471977..1472138 (-) 162 WP_003245246.1 hypothetical protein -
  WHO38_RS07730 cheV 1472342..1473253 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  WHO38_RS07735 kre 1473297..1473761 (-) 465 WP_003232406.1 YkyB family protein Regulator
  WHO38_RS07740 ykuC 1473887..1475179 (-) 1293 WP_003245267.1 MFS transporter -
  WHO38_RS07745 ltdD 1475255..1475749 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  WHO38_RS07750 ppeE 1475806..1476666 (-) 861 WP_003232400.1 metallophosphoesterase -
  WHO38_RS07755 fadH 1476809..1477573 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=951304 WHO38_RS07735 WP_003232406.1 1473297..1473761(-) (kre) [Bacillus subtilis isolate FELIX_MS521]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=951304 WHO38_RS07735 WP_003232406.1 1473297..1473761(-) (kre) [Bacillus subtilis isolate FELIX_MS521]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1