Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WHO38_RS06245 Genome accession   NZ_CP148124
Coordinates   1206326..1206517 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis isolate FELIX_MS521     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1201326..1211517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO38_RS06215 argF 1202190..1203149 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  WHO38_RS06220 yjzC 1203235..1203414 (+) 180 WP_003245356.1 YjzC family protein -
  WHO38_RS06225 yjzD 1203460..1203645 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  WHO38_RS06230 - 1203894..1204628 (+) 735 WP_003245223.1 hypothetical protein -
  WHO38_RS06235 - 1204710..1205267 (+) 558 WP_003232974.1 hypothetical protein -
  WHO38_RS06240 med 1205358..1206311 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  WHO38_RS06245 comZ 1206326..1206517 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  WHO38_RS06250 yjzB 1206547..1206786 (-) 240 WP_003232972.1 spore coat protein YjzB -
  WHO38_RS06255 fabH 1206951..1207889 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  WHO38_RS06260 fabF 1207912..1209153 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  WHO38_RS06265 yjaZ 1209229..1210014 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  WHO38_RS06270 appD 1210206..1211192 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=951296 WHO38_RS06245 WP_003224559.1 1206326..1206517(+) (comZ) [Bacillus subtilis isolate FELIX_MS521]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=951296 WHO38_RS06245 WP_003224559.1 1206326..1206517(+) (comZ) [Bacillus subtilis isolate FELIX_MS521]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1