Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WHO38_RS04720 Genome accession   NZ_CP148124
Coordinates   924364..925158 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis isolate FELIX_MS521     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 919364..930158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO38_RS04690 sxzA 920203..921234 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  WHO38_RS04695 yfhB 921349..922230 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  WHO38_RS04700 yfhC 922318..922902 (+) 585 WP_003243940.1 nitroreductase -
  WHO38_RS04705 yfhD 922941..923132 (-) 192 WP_003233561.1 YfhD family protein -
  WHO38_RS04710 yfhE 923199..923309 (-) 111 WP_003223230.1 YfhE family protein -
  WHO38_RS04715 yfhF 923364..924275 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  WHO38_RS04720 recX 924364..925158 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  WHO38_RS04725 yfhH 925160..925474 (+) 315 WP_003244592.1 YfhH family protein -
  WHO38_RS04730 yfhI 925617..926810 (+) 1194 WP_003243500.1 MFS transporter -
  WHO38_RS04735 sspK 926843..926995 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WHO38_RS04740 yfhJ 927120..927389 (+) 270 WP_003243789.1 YfhJ family protein -
  WHO38_RS04745 yfhK 927534..928052 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WHO38_RS04750 spdL 928137..928469 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  WHO38_RS04755 ephM 928456..929316 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=951287 WHO38_RS04720 WP_003243354.1 924364..925158(+) (recX) [Bacillus subtilis isolate FELIX_MS521]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=951287 WHO38_RS04720 WP_003243354.1 924364..925158(+) (recX) [Bacillus subtilis isolate FELIX_MS521]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1