Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHO22_RS07865 Genome accession   NZ_CP148122
Coordinates   1493304..1493879 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate FELIX_MS513     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1488304..1498879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO22_RS07835 dapD 1488490..1489200 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHO22_RS07840 dapI 1489270..1490394 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WHO22_RS07845 ykuS 1490456..1490701 (+) 246 WP_003232382.1 YkuS family protein -
  WHO22_RS07850 mscT 1490738..1491541 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WHO22_RS07855 ahpA 1491778..1492320 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WHO22_RS07860 ykuV 1492392..1492838 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WHO22_RS07865 rok 1493304..1493879 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WHO22_RS07870 cse15 1493920..1494885 (-) 966 WP_003245018.1 spore protein Cse15 -
  WHO22_RS07875 mobA 1495022..1495621 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WHO22_RS07880 moeB 1495672..1496691 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WHO22_RS07885 glp 1496709..1498001 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WHO22_RS07890 mobB 1497962..1498483 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=951219 WHO22_RS07865 WP_003232378.1 1493304..1493879(+) (rok) [Bacillus subtilis isolate FELIX_MS513]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=951219 WHO22_RS07865 WP_003232378.1 1493304..1493879(+) (rok) [Bacillus subtilis isolate FELIX_MS513]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1