Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHO22_RS07750 Genome accession   NZ_CP148122
Coordinates   1474077..1474541 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate FELIX_MS513     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469077..1479541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO22_RS07730 kinA 1469543..1471363 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  WHO22_RS07735 dapX 1471374..1472555 (-) 1182 WP_003232415.1 aminotransferase A -
  WHO22_RS07740 - 1472757..1472918 (-) 162 WP_003245246.1 hypothetical protein -
  WHO22_RS07745 cheV 1473122..1474033 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  WHO22_RS07750 kre 1474077..1474541 (-) 465 WP_003232406.1 YkyB family protein Regulator
  WHO22_RS07755 ykuC 1474667..1475959 (-) 1293 WP_003245267.1 MFS transporter -
  WHO22_RS07760 ltdD 1476035..1476529 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  WHO22_RS07765 ppeE 1476586..1477446 (-) 861 WP_003232400.1 metallophosphoesterase -
  WHO22_RS07770 fadH 1477589..1478353 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=951218 WHO22_RS07750 WP_003232406.1 1474077..1474541(-) (kre) [Bacillus subtilis isolate FELIX_MS513]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=951218 WHO22_RS07750 WP_003232406.1 1474077..1474541(-) (kre) [Bacillus subtilis isolate FELIX_MS513]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1