Detailed information NTG0951007

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACHP5I_RS27300
• Genome accession: NZ_CP172185
• Coordinates: 5504417..5505442 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GF60
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5499417..5510442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHP5I_RS27280 (ACHP5I_27280)	metJ	5500602..5500919 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACHP5I_RS27285 (ACHP5I_27285)	yiiX	5500979..5501587 (+)	609	WP_000702301.1	YiiX family permuted papain-like enzyme	-
ACHP5I_RS27290 (ACHP5I_27290)	rpmE	5501648..5501860 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACHP5I_RS27295 (ACHP5I_27295)	priA	5502063..5504261 (+)	2199	WP_096990206.1	primosomal protein N'	Machinery gene
ACHP5I_RS27300 (ACHP5I_27300)	cytR	5504417..5505442 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACHP5I_RS27305 (ACHP5I_27305)	ftsN	5505534..5506493 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACHP5I_RS27310 (ACHP5I_27310)	hslV	5506586..5507116 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACHP5I_RS27315 (ACHP5I_27315)	hslU	5507126..5508457 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACHP5I_RS27320 (ACHP5I_27320)	menA	5508524..5509450 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACHP5I_RS27325 (ACHP5I_27325)	rraA	5509543..5510028 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=951007 ACHP5I_RS27300 WP_000644904.1 5504417..5505442(+) (cytR) [Escherichia coli strain GF60]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=951007 ACHP5I_RS27300 WP_000644904.1 5504417..5505442(+) (cytR) [Escherichia coli strain GF60]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATATATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAATATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628