Detailed information NTG0950998

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WHO64_RS02160
• Genome accession: NZ_CP148117
• Coordinates: 428427..429575 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis isolate FELIX_MS509
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423427..434575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHO64_RS02140	yclH	423804..424484 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
WHO64_RS02145	yclI	424500..425960 (-)	1461	WP_003234506.1	ABC transporter permease	-
WHO64_RS02150	yclJ	426173..426856 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
WHO64_RS02155	yclK	426843..428264 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
WHO64_RS02160	rapC	428427..429575 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
WHO64_RS02165	phrC	429559..429681 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
WHO64_RS02170	yczM	429781..429870 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
WHO64_RS02175	yczN	429952..430065 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
WHO64_RS02180	thrD	430219..431583 (-)	1365	WP_003234493.1	aspartate kinase	-
WHO64_RS02185	ceuB	431968..432918 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
WHO64_RS02190	yclO	432911..433858 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=950998 WHO64_RS02160 WP_003246686.1 428427..429575(+) (rapC) [Bacillus subtilis isolate FELIX_MS509]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=950998 WHO64_RS02160 WP_003246686.1 428427..429575(+) (rapC) [Bacillus subtilis isolate FELIX_MS509]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571