Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHO62_RS07850 Genome accession   NZ_CP148114
Coordinates   1492797..1493372 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis isolate FELIX_MS506     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1487797..1498372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO62_RS07820 dapD 1487983..1488693 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHO62_RS07825 dapI 1488763..1489887 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WHO62_RS07830 ykuS 1489949..1490194 (+) 246 WP_003232382.1 YkuS family protein -
  WHO62_RS07835 mscT 1490231..1491034 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WHO62_RS07840 ahpA 1491271..1491813 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WHO62_RS07845 ykuV 1491885..1492331 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WHO62_RS07850 rok 1492797..1493372 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WHO62_RS07855 cse15 1493413..1494378 (-) 966 WP_003245018.1 spore protein Cse15 -
  WHO62_RS07860 mobA 1494515..1495114 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WHO62_RS07865 moeB 1495165..1496184 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WHO62_RS07870 glp 1496202..1497494 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WHO62_RS07875 mobB 1497455..1497976 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=950917 WHO62_RS07850 WP_003232378.1 1492797..1493372(+) (rok) [Bacillus subtilis isolate FELIX_MS506]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=950917 WHO62_RS07850 WP_003232378.1 1492797..1493372(+) (rok) [Bacillus subtilis isolate FELIX_MS506]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1