Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHO32_RS07755 Genome accession   NZ_CP148112
Coordinates   1474153..1474617 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis isolate FELIX_MS504     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469153..1479617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO32_RS07735 kinA 1469619..1471439 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  WHO32_RS07740 dapX 1471450..1472631 (-) 1182 WP_003232415.1 aminotransferase A -
  WHO32_RS07745 - 1472833..1472994 (-) 162 WP_003245246.1 hypothetical protein -
  WHO32_RS07750 cheV 1473198..1474109 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  WHO32_RS07755 kre 1474153..1474617 (-) 465 WP_003232406.1 YkyB family protein Regulator
  WHO32_RS07760 ykuC 1474743..1476035 (-) 1293 WP_003245267.1 MFS transporter -
  WHO32_RS07765 ltdD 1476111..1476605 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  WHO32_RS07770 ppeE 1476662..1477522 (-) 861 WP_003232400.1 metallophosphoesterase -
  WHO32_RS07775 fadH 1477665..1478429 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=950830 WHO32_RS07755 WP_003232406.1 1474153..1474617(-) (kre) [Bacillus subtilis isolate FELIX_MS504]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=950830 WHO32_RS07755 WP_003232406.1 1474153..1474617(-) (kre) [Bacillus subtilis isolate FELIX_MS504]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1