Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   AABA08_RS00815 Genome accession   NZ_AP028602
Coordinates   152129..152569 (-) Length   146 a.a.
NCBI ID   WP_000861968.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PF2     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 147129..157569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA08_RS00790 (TKY092604_01450) - 147482..148015 (+) 534 WP_000729029.1 ABC transporter permease -
  AABA08_RS00795 (TKY092604_01460) nrdI 148093..148563 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  AABA08_RS00800 (TKY092604_01470) - 148856..150118 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  AABA08_RS00805 (TKY092604_01480) - 150502..151455 (+) 954 WP_001155321.1 IS30-like element ISSpn8 family transposase -
  AABA08_RS00810 (TKY092604_01490) - 151674..152132 (-) 459 WP_000745059.1 DUF3021 domain-containing protein -
  AABA08_RS00815 (TKY092604_01500) brsR 152129..152569 (-) 441 WP_000861968.1 LytTR family DNA-binding domain-containing protein Regulator
  AABA08_RS00820 (TKY092604_01510) hexB 152925..154874 (+) 1950 WP_000018159.1 DNA mismatch repair endonuclease MutL Machinery gene
  AABA08_RS00825 (TKY092604_01520) ribE 155199..155666 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  AABA08_RS00830 (TKY092604_01530) - 155667..156872 (-) 1206 WP_016399605.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  AABA08_RS00835 (TKY092604_01540) ribE 156892..157527 (-) 636 WP_016398423.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17137.81 Da        Isoelectric Point: 5.9797

>NTDB_id=95079 AABA08_RS00815 WP_000861968.1 152129..152569(-) (brsR) [Streptococcus pneumoniae strain PF2]
MKVELQISETYEEEKLIVQAPQPTDKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=95079 AABA08_RS00815 WP_000861968.1 152129..152569(-) (brsR) [Streptococcus pneumoniae strain PF2]
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAGCCGACAGATAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGGAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363

Multiple sequence alignment