Detailed information NTG0950682

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: WHO69_RS11860
• Genome accession: NZ_CP148108
• Coordinates: 2594619..2598005 (+)
• Length: 1128 a.a.
• NCBI ID: WP_020333918.1
• Uniprot ID: A0AAN1CWN0
• Organism: Vibrio natriegens isolate FELIX_MS472
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2589619..2603005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHO69_RS11835	erpA	2589986..2590327 (-)	342	WP_014232903.1	iron-sulfur cluster insertion protein ErpA	-
WHO69_RS11840	hemL	2590570..2591865 (+)	1296	WP_014232904.1	glutamate-1-semialdehyde 2,1-aminomutase	-
WHO69_RS11845	-	2592205..2593290 (+)	1086	WP_014232906.1	AI-2E family transporter	-
WHO69_RS11850	rsmC	2593367..2594392 (+)	1026	WP_020333917.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
WHO69_RS11855	-	2594366..2594620 (-)	255	WP_024372754.1	hypothetical protein	-
WHO69_RS11860	chiS	2594619..2598005 (+)	3387	WP_020333918.1	response regulator	Regulator
WHO69_RS11865	-	2598881..2600563 (+)	1683	WP_014232909.1	ABC transporter substrate-binding protein	-
WHO69_RS11870	-	2600735..2601721 (+)	987	WP_014232910.1	ABC transporter permease	-
WHO69_RS11875	-	2601724..2602749 (+)	1026	WP_014232911.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127361.03 Da
• Isoelectric Point: 5.5783

>NTDB_id=950682 WHO69_RS11860 WP_020333918.1 2594619..2598005(+) (chiS) [Vibrio natriegens isolate FELIX_MS472]
MFKFYKKQKFKRLQSTLMTAFLVLSLTPLTITALFFLQSHSQDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRQNAQQRYIEGSGDQTKTSILPESSNFVGSERYRLLHKRYHWAYSELLKRSDF
NDILLVDINGNVTYSIKKDDNYGTNLLTGRYKDAALGRAFQRLANDVSERRKVNEDYTPILISDFELENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLVADKNRESSIETLLVGGDQQPRTINTKLDDIQNSMEVITQALSGQTSVGTYTNGLDEA
IIAAYAPVKTRGVNWALVVQLPEKDAFSRIHQLEKLFVIAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
NTFDTVRKDEIGRLAISFERMQRSIREKIQTIKKQNEELESNIRLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLISGANGTIPANQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVNLASSTRLVLELSGHLLGNKTIRI
INQVPNDLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAGVVDDLVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDES
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEILATQTQAACGHFQVPEINLENTDDLSLPENPE
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCNELRQTFDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIRAHLTASKAEMRHIENKVLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRVRFANEAACKLFKRSLEQIKRSSADELIAPKFLTVKQPHYCGKIDIYIGDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANTARIHNLETAVEVLSRYAFDGDKEQLQKLKELGGEFTRLADKALGNKKDKQEVMREVLVEAMTHA
LEYWESVTGESKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=950682 WHO69_RS11860 WP_020333918.1 2594619..2598005(+) (chiS) [Vibrio natriegens isolate FELIX_MS472]
ATGTTCAAATTCTACAAAAAACAGAAGTTTAAGCGTCTACAAAGTACGCTGATGACTGCGTTTCTTGTCCTCAGCCTTAC
GCCTCTAACCATTACCGCGCTTTTTTTCCTGCAGTCACACAGTCAAGATCTGCAAGAACAGAGCACGTCGCACCTGCTGT
CTGTACGAGATACCAAACAGCAGCAAATTATTGACTATTTTGAAGCACGCGAAACCGAAGTCATGGGCTTTGTCCGTTCG
GAGTTAGCTTATGCCAGCGGTGGACGCTTTTATGGTTTAGTCAATGCGTTCAGTCGCTTAGGAAACGACATTGAAGAGTC
ACGTCAAAATGCACAGCAACGTTATATTGAAGGCAGTGGCGATCAGACAAAAACGTCAATCTTGCCGGAGTCATCTAACT
TTGTCGGGAGCGAGCGTTATCGCCTGTTACACAAGCGCTATCATTGGGCTTATTCAGAACTTCTAAAACGCTCTGACTTC
AATGACATACTTTTAGTCGATATCAACGGTAACGTTACTTACTCAATCAAAAAAGACGACAATTACGGCACTAATCTTCT
CACTGGCCGCTATAAAGATGCTGCCCTAGGTAGAGCGTTTCAGCGCTTGGCCAATGATGTCAGCGAGCGCCGTAAAGTAA
ACGAAGACTATACTCCAATCCTTATCTCTGACTTTGAACTTGAAAATGGCAAGCAAGTCGCGTGGCTTGGCGCTCCTATC
GTTCAACAAGGATATCTCCATAGCTATGCCATGTTCCGATTACCAAATAATGGCATAACTAAACTAGTCGCAGACAAAAA
CCGCGAGTCATCGATTGAGACGCTATTAGTCGGAGGAGATCAACAACCTCGAACCATTAACACCAAGCTAGATGATATCC
AAAACAGTATGGAGGTCATCACTCAGGCACTTTCAGGTCAAACAAGCGTAGGTACTTATACAAACGGGCTCGATGAAGCC
ATTATCGCCGCCTATGCGCCAGTTAAAACCCGTGGTGTGAATTGGGCGTTGGTCGTGCAGTTACCAGAAAAAGACGCCTT
TTCTCGCATTCACCAGCTGGAAAAACTCTTCGTCATTGCGATGCTTACGGCGATCATACTGGTTGTGATTGCCTCGCACT
ATTTATCGAATTTCATCACCTCGCCACTGCTTAAATTAACCTGGGCAGCAGAGCGAGTATCAGCAGGCGATCTGGACGAA
AACACATTTGATACTGTTAGAAAAGACGAAATTGGTCGCTTAGCCATCAGTTTTGAGCGCATGCAACGTTCCATTCGTGA
AAAAATTCAGACGATCAAGAAGCAAAATGAAGAGCTGGAAAGCAACATCCGCTTAATTCAAAAACAAAATGACGAGCTGC
AACTGGCAGACAAGCTAAAAGATGAGTTTCTGGCAACGACCTCTCATGAACTGCGTACACCTTTGCACGGCATGGTCGGT
ATTGCAGAAACCTTGATATCCGGAGCCAACGGTACAATTCCGGCAAACCAGAAGTATCAGCTTGATATAATTATTAAAAG
TGGCCAACGTTTGGCTAACCTGGTCGACGACTTACTGGATTACCATAAAATGCGATACGGTAGCATGGACATCCAGAAGT
CGGCTGTTAACCTGGCAAGTTCAACCCGATTGGTGCTGGAGTTGTCGGGTCATTTACTTGGAAACAAGACCATTCGAATC
ATCAATCAAGTACCTAATGATCTCAAAGCAGTCTCAGCGGACCCACAACGACTTGAACAGGTGCTTTACAATCTGATAGG
AAACGCAATTAAGTACACCTCTGAAGGTAAGATCGTTATTTCTGCAGGAGTCGTAGACGATTTAGTTCGCGTTCAAGTGG
TCGATACCGGACAAGGTATTCCTGCTGAGCACCTTGAGCACATCTTTGAGCCTTTAATTCAAGCAGGACAGGACGAAAGT
CGATATCGTCAAGGTGCGGGGTTAGGTTTATCAATTAGCCGCCAGTTGATTGAGCTAATGGGAGGCTCCTTATATGTCAG
CAGCCAACCTATGGTAGGGACCACATTCAGCTTCACTCTGCCTCTCGCCAGTGAAGAAGAGATCCTAGCAACACAGACGC
AGGCAGCCTGTGGGCACTTCCAGGTTCCAGAAATTAACCTTGAGAACACAGACGACCTATCGCTACCAGAAAACCCAGAA
GGTCCGCTACTTTATGTAGCAGACGATGAACCAGTCAACCTACGAGTACTTGAAAGCTTTTTACGCTTAGAAGGCTATCG
TGTAAGAACCGTTTCAGATGGTCCAGAAACACTTGCTCTTGTCGAACAAGAAAAGCCGGAACTGCTGCTGCTCGATATCA
TGATGCCAGGAATGAGTGGCTATCAAGTATGTAATGAATTGCGTCAAACCTTTGATCATGCTGAGCTGCCAATCATTATG
CTAACCGCCTTAAGTCAAACTGAAGACCGAGTTAGAGGCTTTGAAGCCGGAGCAAACGATTATTTGTCGAAGCCTTTTAA
CAAACAAGAGCTTGCAGCCAGAATTAGAGCTCATTTGACCGCAAGTAAAGCAGAGATGCGCCATATTGAGAATAAAGTAC
TTGAGTCGGAACTTCGTCAACGAGCTGAAGTAGAAGCGAGCTTGCTTGAAACTCAGGGGCGTCTGCTAGAGCAGCTTGAG
TCCGCTCCTGAGGCGATTATTTGCTTGCGCGAAGATCAACGTGTTCGTTTTGCCAACGAAGCCGCATGTAAGCTGTTTAA
ACGTAGCTTAGAGCAAATTAAACGTTCGTCTGCCGATGAGCTGATTGCTCCAAAATTTCTGACCGTTAAGCAGCCACATT
ATTGCGGGAAAATTGATATTTATATCGGGGACATTCGCCAAAATATTGAAGCGGACATCCTTAAGCTTCCAGAAGGTTCC
GGCCTAGACGTTATGTACATATTTAATGTCGGTGGCGGCGCAAATACAGCGCGCATTCACAATCTGGAAACGGCAGTGGA
GGTACTTTCTCGCTATGCCTTTGACGGCGACAAAGAACAGCTACAGAAGCTTAAAGAGCTTGGAGGCGAGTTCACTCGAC
TGGCAGACAAAGCACTAGGCAATAAAAAAGACAAACAAGAAGTTATGCGTGAAGTACTGGTCGAAGCGATGACACATGCT
TTGGAATACTGGGAGTCTGTCACTGGAGAAAGTAAGTTTACCTTTGCCGAGCAAAGTGGTCTTTGGCGCGTTTACCTTGA
TAGAAGTACGCTACAAACCCGTACTCTAGATAAATACATGCGCATTGAAACCTTACCTAAAACTCCGCGCTGGAGAACGG
TTTTAAGCTCTATCGAGTTCATCCTTGAGCACTGTAAAGAACAAAGTCCGGAGCGTGCTTACATTGAAGCGCAGCGTGAC
AAGCTGCAAAGGTTACTTACCAGCTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.554	100	0.756