Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHL98_RS07865 Genome accession   NZ_CP148104
Coordinates   1494643..1495218 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS438     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1489643..1500218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL98_RS07835 dapD 1489829..1490539 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHL98_RS07840 dapI 1490609..1491733 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WHL98_RS07845 ykuS 1491795..1492040 (+) 246 WP_003232382.1 YkuS family protein -
  WHL98_RS07850 mscT 1492077..1492880 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WHL98_RS07855 ahpA 1493117..1493659 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WHL98_RS07860 ykuV 1493731..1494177 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WHL98_RS07865 rok 1494643..1495218 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WHL98_RS07870 cse15 1495259..1496224 (-) 966 WP_003245018.1 spore protein Cse15 -
  WHL98_RS07875 mobA 1496361..1496960 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WHL98_RS07880 moeB 1497011..1498030 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WHL98_RS07885 glp 1498048..1499340 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WHL98_RS07890 mobB 1499301..1499822 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=950592 WHL98_RS07865 WP_003232378.1 1494643..1495218(+) (rok) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=950592 WHL98_RS07865 WP_003232378.1 1494643..1495218(+) (rok) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1