Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHL98_RS07750 Genome accession   NZ_CP148104
Coordinates   1475416..1475880 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS438     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1470416..1480880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL98_RS07730 kinA 1470882..1472702 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  WHL98_RS07735 dapX 1472713..1473894 (-) 1182 WP_003232415.1 aminotransferase A -
  WHL98_RS07740 - 1474096..1474257 (-) 162 WP_003245246.1 hypothetical protein -
  WHL98_RS07745 cheV 1474461..1475372 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  WHL98_RS07750 kre 1475416..1475880 (-) 465 WP_003232406.1 YkyB family protein Regulator
  WHL98_RS07755 ykuC 1476006..1477298 (-) 1293 WP_003245267.1 MFS transporter -
  WHL98_RS07760 ltdD 1477374..1477868 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  WHL98_RS07765 ppeE 1477925..1478785 (-) 861 WP_003232400.1 metallophosphoesterase -
  WHL98_RS07770 fadH 1478928..1479692 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=950591 WHL98_RS07750 WP_003232406.1 1475416..1475880(-) (kre) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=950591 WHL98_RS07750 WP_003232406.1 1475416..1475880(-) (kre) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1