Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WHL98_RS04735 Genome accession   NZ_CP148104
Coordinates   926490..927284 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS438     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 921490..932284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL98_RS04705 sxzA 922329..923360 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  WHL98_RS04710 yfhB 923475..924356 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  WHL98_RS04715 yfhC 924444..925028 (+) 585 WP_003243940.1 nitroreductase -
  WHL98_RS04720 yfhD 925067..925258 (-) 192 WP_003233561.1 YfhD family protein -
  WHL98_RS04725 yfhE 925325..925435 (-) 111 WP_003223230.1 YfhE family protein -
  WHL98_RS04730 yfhF 925490..926401 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  WHL98_RS04735 recX 926490..927284 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  WHL98_RS04740 yfhH 927286..927600 (+) 315 WP_003244592.1 YfhH family protein -
  WHL98_RS04745 yfhI 927743..928936 (+) 1194 WP_003243500.1 MFS transporter -
  WHL98_RS04750 sspK 928969..929121 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WHL98_RS04755 yfhJ 929246..929515 (+) 270 WP_003243789.1 YfhJ family protein -
  WHL98_RS04760 yfhK 929660..930178 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WHL98_RS04765 spdL 930263..930595 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  WHL98_RS04770 ephM 930582..931442 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=950574 WHL98_RS04735 WP_003243354.1 926490..927284(+) (recX) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=950574 WHL98_RS04735 WP_003243354.1 926490..927284(+) (recX) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1