Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHL49_RS07725 Genome accession   NZ_CP148103
Coordinates   1473672..1474247 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS361     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1468672..1479247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL49_RS07695 dapD 1468858..1469568 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHL49_RS07700 dapI 1469638..1470762 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WHL49_RS07705 ykuS 1470824..1471069 (+) 246 WP_003232382.1 YkuS family protein -
  WHL49_RS07710 mscT 1471106..1471909 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WHL49_RS07715 ahpA 1472146..1472688 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WHL49_RS07720 ykuV 1472760..1473206 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WHL49_RS07725 rok 1473672..1474247 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WHL49_RS07730 cse15 1474288..1475253 (-) 966 WP_003245018.1 spore protein Cse15 -
  WHL49_RS07735 mobA 1475390..1475989 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WHL49_RS07740 moeB 1476040..1477059 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WHL49_RS07745 glp 1477077..1478369 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WHL49_RS07750 mobB 1478330..1478851 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=950506 WHL49_RS07725 WP_003232378.1 1473672..1474247(+) (rok) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=950506 WHL49_RS07725 WP_003232378.1 1473672..1474247(+) (rok) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1