Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   WHL49_RS06245 Genome accession   NZ_CP148103
Coordinates   1209767..1210918 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS361     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1204767..1215918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL49_RS06210 yjbB 1205439..1206656 (+) 1218 WP_010886478.1 MFS transporter -
  WHL49_RS06215 yjbC 1206820..1207398 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  WHL49_RS06220 spx 1207579..1207974 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  WHL49_RS06225 yjbE 1208017..1208673 (-) 657 WP_003232944.1 TerC family protein -
  WHL49_RS06230 - 1208843..1208983 (+) 141 WP_119122854.1 hypothetical protein -
  WHL49_RS06235 mecA 1208950..1209606 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  WHL49_RS06240 - 1209601..1209723 (-) 123 WP_003245684.1 hypothetical protein -
  WHL49_RS06245 coiA 1209767..1210918 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  WHL49_RS06250 pepF 1211148..1212977 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  WHL49_RS06255 - 1213015..1213182 (-) 168 WP_003244944.1 hypothetical protein -
  WHL49_RS06260 spxH 1213496..1214395 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  WHL49_RS06265 yjbI 1214392..1214790 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  WHL49_RS06270 cwlQ 1215045..1215779 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=950501 WHL49_RS06245 WP_003245839.1 1209767..1210918(+) (coiA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=950501 WHL49_RS06245 WP_003245839.1 1209767..1210918(+) (coiA) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974