Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WHL49_RS04600 Genome accession   NZ_CP148103
Coordinates   905519..906313 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS361     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 900519..911313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL49_RS04570 sxzA 901358..902389 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  WHL49_RS04575 yfhB 902504..903385 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  WHL49_RS04580 yfhC 903473..904057 (+) 585 WP_003243940.1 nitroreductase -
  WHL49_RS04585 yfhD 904096..904287 (-) 192 WP_003233561.1 YfhD family protein -
  WHL49_RS04590 yfhE 904354..904464 (-) 111 WP_003223230.1 YfhE family protein -
  WHL49_RS04595 yfhF 904519..905430 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  WHL49_RS04600 recX 905519..906313 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  WHL49_RS04605 yfhH 906315..906629 (+) 315 WP_003244592.1 YfhH family protein -
  WHL49_RS04610 yfhI 906772..907965 (+) 1194 WP_003243500.1 MFS transporter -
  WHL49_RS04615 sspK 907998..908150 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WHL49_RS04620 yfhJ 908275..908544 (+) 270 WP_003243789.1 YfhJ family protein -
  WHL49_RS04625 yfhK 908689..909207 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WHL49_RS04630 spdL 909292..909624 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  WHL49_RS04635 ephM 909611..910471 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=950488 WHL49_RS04600 WP_003243354.1 905519..906313(+) (recX) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=950488 WHL49_RS04600 WP_003243354.1 905519..906313(+) (recX) [Bacillus subtilis subsp. subtilis isolate FELIX_MS361]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1