Detailed information NTG0950465

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: WHL51_RS18745
• Genome accession: NZ_CP148102
• Coordinates: 3661250..3662395 (+)
• Length: 381 a.a.
• NCBI ID: WP_003222022.1
• Uniprot ID: -
• Organism: Bacillus spizizenii str. W23
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3656250..3667395

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHL51_RS18720	-	3656385..3657545 (+)	1161	WP_079996665.1	insulinase family protein	-
WHL51_RS18725	-	3657550..3658833 (+)	1284	WP_003222013.1	pitrilysin family protein	-
WHL51_RS18730	albG	3658830..3659531 (+)	702	WP_003222015.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
WHL51_RS18735	-	3659537..3659656 (-)	120	Protein_3644	hypothetical protein	-
WHL51_RS18740	-	3659668..3661023 (-)	1356	WP_003222017.1	YncE family protein	-
WHL51_RS18745	rapF	3661250..3662395 (+)	1146	WP_003222022.1	response regulator aspartate phosphatase RapF	Regulator
WHL51_RS18750	phrF	3662379..3662498 (+)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
WHL51_RS18755	speB	3662651..3663523 (-)	873	WP_003222025.1	agmatinase	-
WHL51_RS18760	speE	3663584..3664414 (-)	831	WP_003222027.1	spermidine synthase	-
WHL51_RS18765	-	3664616..3666691 (+)	2076	WP_003222029.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45659.13 Da
• Isoelectric Point: 5.5270

>NTDB_id=950465 WHL51_RS18745 WP_003222022.1 3661250..3662395(+) (rapF) [Bacillus spizizenii str. W23]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAKAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QRFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=950465 WHL51_RS18745 WP_003222022.1 3661250..3662395(+) (rapF) [Bacillus spizizenii str. W23]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAAGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAGAAAATGCGGATCGAGGAACAGCCGAGA
TTGTCAGATTTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
AGGCATGTATGAGCTAGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTTG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTACAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCTACCAATTTCTTAGATTTAAAACAATATGAGGATGCCATCTCACATTTTAAAAAAGCTTACTCTATGGCGAAAG
CTGAGAATCAGCCCCAATTAATGGGGAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAGGAATCTAACATTCTTCCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAATTGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATCTATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGGTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	96.063	100	0.961
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575