Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | WHL51_RS08465 | Genome accession | NZ_CP148102 |
| Coordinates | 1639538..1640431 (+) | Length | 297 a.a. |
| NCBI ID | WP_003220839.1 | Uniprot ID | E0TUA0 |
| Organism | Bacillus spizizenii str. W23 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1621554..1662538 | 1639538..1640431 | within | 0 |
Gene organization within MGE regions
Location: 1621554..1662538
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHL51_RS08375 | smc | 1622255..1625815 (+) | 3561 | WP_003221570.1 | chromosome segregation protein SMC | - |
| WHL51_RS08380 | ftsY | 1625835..1626824 (+) | 990 | WP_003221572.1 | signal recognition particle-docking protein FtsY | - |
| WHL51_RS08385 | - | 1626959..1628058 (+) | 1100 | WP_230939496.1 | IS3 family transposase | - |
| WHL51_RS08390 | - | 1628122..1628607 (-) | 486 | WP_003220807.1 | Ig-like domain-containing protein | - |
| WHL51_RS08395 | - | 1628786..1629118 (+) | 333 | WP_003220809.1 | putative DNA-binding protein | - |
| WHL51_RS08400 | ffh | 1629132..1630472 (+) | 1341 | WP_003220811.1 | signal recognition particle protein | - |
| WHL51_RS08405 | rpsP | 1630578..1630850 (+) | 273 | WP_003220815.1 | 30S ribosomal protein S16 | - |
| WHL51_RS08410 | - | 1630850..1631095 (+) | 246 | WP_003220817.1 | KH domain-containing protein | - |
| WHL51_RS08415 | - | 1631217..1631603 (+) | 387 | WP_003220819.1 | YlqD family protein | - |
| WHL51_RS08420 | rimM | 1631608..1632132 (+) | 525 | WP_003220821.1 | ribosome maturation factor RimM | - |
| WHL51_RS08425 | trmD | 1632129..1632860 (+) | 732 | WP_003220823.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| WHL51_RS08430 | rplS | 1633000..1633347 (+) | 348 | WP_003220825.1 | 50S ribosomal protein L19 | - |
| WHL51_RS08435 | ylqF | 1633492..1634340 (+) | 849 | WP_003220827.1 | ribosome biogenesis GTPase YlqF | - |
| WHL51_RS08440 | rnhB | 1634411..1635178 (+) | 768 | WP_003220829.1 | ribonuclease HII | - |
| WHL51_RS08445 | - | 1635207..1636937 (+) | 1731 | WP_003220832.1 | hypothetical protein | - |
| WHL51_RS08450 | - | 1636934..1637215 (+) | 282 | WP_003220834.1 | FlhB-like flagellar biosynthesis protein | - |
| WHL51_RS08455 | sucC | 1637389..1638546 (+) | 1158 | WP_003220835.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| WHL51_RS08460 | sucD | 1638575..1639477 (+) | 903 | WP_003220837.1 | succinate--CoA ligase subunit alpha | - |
| WHL51_RS08465 | dprA | 1639538..1640431 (+) | 894 | WP_003220839.1 | DNA-processing protein DprA | Machinery gene |
| WHL51_RS08470 | topA | 1640618..1642693 (+) | 2076 | WP_003220843.1 | type I DNA topoisomerase | - |
| WHL51_RS08475 | trmFO | 1642769..1644076 (+) | 1308 | WP_003220844.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| WHL51_RS08480 | xerC | 1644144..1645058 (+) | 915 | WP_003220846.1 | tyrosine recombinase XerC | - |
| WHL51_RS08485 | clpQ | 1645071..1645616 (+) | 546 | WP_003220848.1 | ATP-dependent protease subunit ClpQ | - |
| WHL51_RS08490 | hslU | 1645633..1647025 (+) | 1393 | Protein_1628 | HslU--HslV peptidase ATPase subunit | - |
| WHL51_RS08495 | codY | 1647065..1647844 (+) | 780 | WP_003220850.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| WHL51_RS08500 | flgB | 1648225..1648614 (+) | 390 | WP_003220852.1 | flagellar basal body rod protein FlgB | - |
| WHL51_RS08505 | flgC | 1648614..1649066 (+) | 453 | WP_003220854.1 | flagellar basal body rod protein FlgC | - |
| WHL51_RS08510 | fliE | 1649078..1649398 (+) | 321 | WP_003238544.1 | flagellar hook-basal body complex protein FliE | - |
| WHL51_RS08515 | fliF | 1649444..1651054 (+) | 1611 | WP_079996358.1 | flagellar basal-body MS-ring/collar protein FliF | - |
| WHL51_RS08520 | fliG | 1651067..1652083 (+) | 1017 | WP_003220860.1 | flagellar motor switch protein FliG | - |
| WHL51_RS08525 | fliH | 1652076..1652828 (+) | 753 | WP_003220862.1 | flagellar assembly protein FliH | - |
| WHL51_RS08530 | fliI | 1652825..1654141 (+) | 1317 | WP_003220864.1 | flagellar protein export ATPase FliI | - |
| WHL51_RS08535 | fliJ | 1654144..1654587 (+) | 444 | WP_003220866.1 | flagellar export protein FliJ | - |
| WHL51_RS08540 | - | 1654599..1655213 (+) | 615 | WP_003220869.1 | MotE family protein | - |
| WHL51_RS08545 | - | 1655225..1656688 (+) | 1464 | WP_003220871.1 | flagellar hook-length control protein FliK | - |
| WHL51_RS08550 | flgD | 1656685..1657107 (+) | 423 | WP_003220873.1 | flagellar hook assembly protein FlgD | - |
| WHL51_RS08555 | flgG | 1657129..1657923 (+) | 795 | WP_003220874.1 | flagellar basal body rod protein FlgG | - |
| WHL51_RS08560 | swrD | 1657963..1658178 (+) | 216 | WP_003220876.1 | swarming motility protein SwrD | - |
| WHL51_RS08565 | fliL | 1658175..1658600 (+) | 426 | WP_003220878.1 | flagellar basal body-associated protein FliL | - |
| WHL51_RS08570 | fliM | 1658634..1659632 (+) | 999 | WP_003220879.1 | flagellar motor switch protein FliM | - |
| WHL51_RS08575 | fliY | 1659622..1660761 (+) | 1140 | WP_003220881.1 | flagellar motor switch phosphatase FliY | - |
| WHL51_RS08580 | cheY | 1660787..1661149 (+) | 363 | WP_003220882.1 | chemotaxis protein CheY | - |
| WHL51_RS08585 | fliZ | 1661164..1661823 (+) | 660 | WP_003220884.1 | flagella biosynthesis regulatory protein FliZ | - |
| WHL51_RS08590 | fliP | 1661816..1662481 (+) | 666 | WP_003220886.1 | flagellar type III secretion system pore protein FliP | - |
Sequence
Protein
Download Length: 297 a.a. Molecular weight: 32921.32 Da Isoelectric Point: 9.9037
>NTDB_id=950424 WHL51_RS08465 WP_003220839.1 1639538..1640431(+) (dprA) [Bacillus spizizenii str. W23]
MDQAAACLMICRINQLLSPSLLLKWWKADPSMSLTSPVLETVTRGKIKAAALKNKIEEQYPKLQRVLAAYHEQGINPIPI
SSKQYPFWLKTIYDPPAVLFAKGDLTLLSKGRKIGIVGTRNPTAYGIQIVNHLTKELCRKNWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
MDQAAACLMICRINQLLSPSLLLKWWKADPSMSLTSPVLETVTRGKIKAAALKNKIEEQYPKLQRVLAAYHEQGINPIPI
SSKQYPFWLKTIYDPPAVLFAKGDLTLLSKGRKIGIVGTRNPTAYGIQIVNHLTKELCRKNWVIVSGLASGIDGMSHAAS
IKAKGRTIGVIAGGFQHIYPRENLQLADHMAKHHILLSEHPPETKPQKWHFPMRNRIISGLSEGVIVVQGKEKSGSLITA
YQALEQGREVFAVPGSLFDPYAGGPIKLIQQGAKAIWSAEDIFEELPERNVQYTEPF
Nucleotide
Download Length: 894 bp
>NTDB_id=950424 WHL51_RS08465 WP_003220839.1 1639538..1640431(+) (dprA) [Bacillus spizizenii str. W23]
TTGGATCAGGCCGCTGCCTGTTTAATGATTTGCAGAATCAATCAATTATTATCCCCATCCCTTCTATTAAAATGGTGGAA
AGCTGATCCGTCTATGTCGCTGACTTCACCCGTGTTAGAAACTGTTACTCGAGGTAAAATAAAGGCAGCTGCATTAAAAA
ATAAAATAGAAGAACAATATCCAAAGCTTCAGCGTGTACTTGCTGCTTACCATGAGCAAGGAATTAACCCCATCCCGATT
TCTTCAAAGCAATATCCTTTCTGGCTGAAAACCATTTATGATCCCCCCGCCGTCCTGTTTGCAAAGGGTGATTTGACCCT
TCTTTCTAAAGGGAGGAAAATTGGAATTGTAGGGACAAGAAATCCAACAGCTTATGGGATACAAATTGTCAATCATCTTA
CAAAAGAGCTTTGCCGTAAAAATTGGGTGATTGTCAGCGGACTGGCGTCTGGGATAGACGGAATGTCCCATGCTGCAAGT
ATTAAGGCGAAGGGGCGGACAATCGGCGTCATTGCGGGCGGATTTCAACACATATATCCCCGGGAAAACCTTCAGTTAGC
AGATCATATGGCTAAACACCATATCCTTCTGTCAGAGCACCCACCTGAAACCAAACCCCAAAAATGGCATTTCCCTATGA
GAAACCGTATCATTAGCGGATTAAGTGAAGGCGTTATTGTCGTGCAGGGCAAAGAAAAAAGTGGTTCGCTGATTACTGCA
TATCAAGCACTGGAACAAGGAAGAGAAGTATTTGCCGTACCCGGCTCATTATTTGATCCGTACGCAGGAGGTCCTATAAA
ACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCAGAGGATATTTTCGAGGAGCTTCCTGAGAGAAACGTTCAATATA
CGGAACCCTTTTGA
TTGGATCAGGCCGCTGCCTGTTTAATGATTTGCAGAATCAATCAATTATTATCCCCATCCCTTCTATTAAAATGGTGGAA
AGCTGATCCGTCTATGTCGCTGACTTCACCCGTGTTAGAAACTGTTACTCGAGGTAAAATAAAGGCAGCTGCATTAAAAA
ATAAAATAGAAGAACAATATCCAAAGCTTCAGCGTGTACTTGCTGCTTACCATGAGCAAGGAATTAACCCCATCCCGATT
TCTTCAAAGCAATATCCTTTCTGGCTGAAAACCATTTATGATCCCCCCGCCGTCCTGTTTGCAAAGGGTGATTTGACCCT
TCTTTCTAAAGGGAGGAAAATTGGAATTGTAGGGACAAGAAATCCAACAGCTTATGGGATACAAATTGTCAATCATCTTA
CAAAAGAGCTTTGCCGTAAAAATTGGGTGATTGTCAGCGGACTGGCGTCTGGGATAGACGGAATGTCCCATGCTGCAAGT
ATTAAGGCGAAGGGGCGGACAATCGGCGTCATTGCGGGCGGATTTCAACACATATATCCCCGGGAAAACCTTCAGTTAGC
AGATCATATGGCTAAACACCATATCCTTCTGTCAGAGCACCCACCTGAAACCAAACCCCAAAAATGGCATTTCCCTATGA
GAAACCGTATCATTAGCGGATTAAGTGAAGGCGTTATTGTCGTGCAGGGCAAAGAAAAAAGTGGTTCGCTGATTACTGCA
TATCAAGCACTGGAACAAGGAAGAGAAGTATTTGCCGTACCCGGCTCATTATTTGATCCGTACGCAGGAGGTCCTATAAA
ACTGATCCAGCAGGGGGCTAAAGCCATATGGTCAGCAGAGGATATTTTCGAGGAGCTTCCTGAGAGAAACGTTCAATATA
CGGAACCCTTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Bacillus subtilis subsp. subtilis str. 168 |
94.276 |
100 |
0.943 |