Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHL51_RS07500 Genome accession   NZ_CP148102
Coordinates   1446739..1447326 (+) Length   195 a.a.
NCBI ID   WP_003218692.1    Uniprot ID   -
Organism   Bacillus spizizenii str. W23     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1441739..1452326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL51_RS07470 dapD 1441926..1442636 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHL51_RS07475 - 1442706..1443830 (+) 1125 WP_003218682.1 N-acetyldiaminopimelate deacetylase -
  WHL51_RS07480 - 1443892..1444137 (+) 246 WP_003218684.1 YkuS family protein -
  WHL51_RS07485 mscT 1444173..1444976 (-) 804 WP_003218686.1 small-conductance mechanosensitive channel protein MscT -
  WHL51_RS07490 ahpA 1445221..1445763 (+) 543 WP_003218688.1 biofilm-specific peroxidase AhpA -
  WHL51_RS07495 ykuV 1445833..1446291 (+) 459 WP_003218690.1 thiol-disulfide oxidoreductase YkuV -
  WHL51_RS07500 rok 1446739..1447326 (+) 588 WP_003218692.1 transcriptional regulator Rok Regulator
  WHL51_RS07505 cse15 1447366..1448331 (-) 966 WP_003218694.1 spore protein Cse15 -
  WHL51_RS07510 - 1448467..1449066 (+) 600 WP_003218697.1 molybdenum cofactor guanylyltransferase -
  WHL51_RS07515 - 1449117..1450136 (+) 1020 WP_003218699.1 MoeB/ThiF family adenylyltransferase -
  WHL51_RS07520 glp 1450154..1451446 (+) 1293 WP_003218701.1 gephyrin-like molybdotransferase Glp -
  WHL51_RS07525 mobB 1451407..1451928 (+) 522 WP_003218703.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22244.23 Da        Isoelectric Point: 9.7036

>NTDB_id=950422 WHL51_RS07500 WP_003218692.1 1446739..1447326(+) (rok) [Bacillus spizizenii str. W23]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEIESTESAESANE

Nucleotide


Download         Length: 588 bp        

>NTDB_id=950422 WHL51_RS07500 WP_003218692.1 1446739..1447326(+) (rok) [Bacillus spizizenii str. W23]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCCGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAG
AAGAAGAGGGACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACG
CGGCGATTAAGAGTTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATG
CAAAGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTACATTTTAGAAGGCGAAATTGAATCAAC
TGAATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

97.949

100

0.979