Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHL51_RS07400 Genome accession   NZ_CP148102
Coordinates   1430890..1431354 (-) Length   154 a.a.
NCBI ID   WP_003218659.1    Uniprot ID   E0U3A0
Organism   Bacillus spizizenii str. W23     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1425890..1436354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL51_RS07380 kinA 1426356..1428176 (+) 1821 WP_003218651.1 sporulation histidine kinase KinA -
  WHL51_RS07385 - 1428186..1429367 (-) 1182 WP_003218653.1 aminotransferase A -
  WHL51_RS07390 - 1429569..1429730 (-) 162 WP_003218655.1 hypothetical protein -
  WHL51_RS07395 cheV 1429937..1430848 (+) 912 WP_003218657.1 chemotaxis protein CheV -
  WHL51_RS07400 kre 1430890..1431354 (-) 465 WP_003218659.1 YkyB family protein Regulator
  WHL51_RS07405 - 1431480..1432772 (-) 1293 WP_003218661.1 MFS transporter -
  WHL51_RS07410 - 1432848..1433342 (-) 495 WP_079996611.1 L,D-transpeptidase family protein -
  WHL51_RS07415 - 1433400..1434260 (-) 861 WP_003218664.1 metallophosphoesterase -
  WHL51_RS07420 fadH 1434402..1435166 (+) 765 WP_003218667.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17894.76 Da        Isoelectric Point: 10.4658

>NTDB_id=950421 WHL51_RS07400 WP_003218659.1 1430890..1431354(-) (kre) [Bacillus spizizenii str. W23]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=950421 WHL51_RS07400 WP_003218659.1 1430890..1431354(-) (kre) [Bacillus spizizenii str. W23]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAAAATATGTGGGCATGAAAGAAAAACCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTTTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0U3A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994