Detailed information NTG0950325

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACHP5Q_RS13705
• Genome accession: NZ_CP172140
• Coordinates: 2813936..2814961 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain GF130
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2808936..2819961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHP5Q_RS13685 (ACHP5Q_13685)	metJ	2810121..2810438 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACHP5Q_RS13690 (ACHP5Q_13690)	yiiX	2810498..2811106 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
ACHP5Q_RS13695 (ACHP5Q_13695)	rpmE	2811167..2811379 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACHP5Q_RS13700 (ACHP5Q_13700)	priA	2811582..2813780 (+)	2199	WP_001334265.1	primosomal protein N'	Machinery gene
ACHP5Q_RS13705 (ACHP5Q_13705)	cytR	2813936..2814961 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
ACHP5Q_RS13710 (ACHP5Q_13710)	ftsN	2815053..2816012 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACHP5Q_RS13715 (ACHP5Q_13715)	hslV	2816105..2816635 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACHP5Q_RS13720 (ACHP5Q_13720)	hslU	2816645..2817976 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACHP5Q_RS13725 (ACHP5Q_13725)	menA	2818043..2818969 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACHP5Q_RS13730 (ACHP5Q_13730)	rraA	2819062..2819547 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACHP5Q_RS13735 (ACHP5Q_13735)	zapB	2819631..2819876 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=950325 ACHP5Q_RS13705 WP_000644911.1 2813936..2814961(+) (cytR) [Escherichia coli strain GF130]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=950325 ACHP5Q_RS13705 WP_000644911.1 2813936..2814961(+) (cytR) [Escherichia coli strain GF130]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625