Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   WGR16_RS07910 Genome accession   NZ_CP148009
Coordinates   1674254..1674880 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain FUJ80059     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1669254..1679880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WGR16_RS07890 (WGR16_07880) - 1669653..1671413 (-) 1761 WP_032657964.1 Lon protease family protein -
  WGR16_RS07895 (WGR16_07885) matP 1671600..1672052 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  WGR16_RS07900 (WGR16_07890) ompA 1672118..1673170 (-) 1053 WP_017694761.1 porin OmpA -
  WGR16_RS07905 (WGR16_07895) sulA 1673527..1674036 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  WGR16_RS07910 (WGR16_07900) sxy/tfoX 1674254..1674880 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  WGR16_RS07915 (WGR16_07905) yccS 1674837..1676999 (-) 2163 WP_045894111.1 YccS family putative transporter -
  WGR16_RS07920 (WGR16_07910) - 1677018..1677464 (-) 447 WP_003858149.1 YccF domain-containing protein -
  WGR16_RS07925 (WGR16_07915) helD 1677587..1679641 (+) 2055 WP_032608969.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=950042 WGR16_RS07910 WP_023315767.1 1674254..1674880(+) (sxy/tfoX) [Enterobacter hormaechei strain FUJ80059]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=950042 WGR16_RS07910 WP_023315767.1 1674254..1674880(+) (sxy/tfoX) [Enterobacter hormaechei strain FUJ80059]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572