Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   WGQ51_RS01650 Genome accession   NZ_CP148000
Coordinates   299432..300610 (+) Length   392 a.a.
NCBI ID   WP_263660556.1    Uniprot ID   -
Organism   Campylobacter lari strain NPRC(S) 01.13900     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 294432..305610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WGQ51_RS01635 (WGQ51_01635) cysC 295178..295762 (+) 585 WP_264290979.1 adenylyl-sulfate kinase -
  WGQ51_RS01640 (WGQ51_01640) - 295759..297372 (+) 1614 WP_338816237.1 hypothetical protein -
  WGQ51_RS01645 (WGQ51_01645) - 297408..299435 (+) 2028 WP_338816238.1 capsular polysaccharide biosynthesis protein -
  WGQ51_RS01650 (WGQ51_01650) kpsS 299432..300610 (+) 1179 WP_263660556.1 capsular biosynthesis protein Regulator
  WGQ51_RS01655 (WGQ51_01655) - 300607..302115 (-) 1509 WP_263683520.1 SGNH/GDSL hydrolase family protein -
  WGQ51_RS01660 (WGQ51_01660) - 302277..303407 (+) 1131 WP_263683521.1 DUF829 domain-containing protein -
  WGQ51_RS01665 (WGQ51_01665) - 303417..304790 (+) 1374 WP_263683522.1 cytochrome P450 -
  WGQ51_RS01670 (WGQ51_01670) - 304787..305140 (+) 354 WP_039627957.1 membrane protein -

Sequence

Protein


Download         Length: 392 a.a.        Molecular weight: 46421.01 Da        Isoelectric Point: 10.1617

>NTDB_id=949909 WGQ51_RS01650 WP_263660556.1 299432..300610(+) (kpsS) [Campylobacter lari strain NPRC(S) 01.13900]
MNLSKKLKKFSGKNVLLLQGPVGGFFRKIATKIPKAKVYKVNFNGGDFFFYPFKSINYTKSLAELEDFYKKLFEEKQIQV
IIMYNDCRKVHEIAINVAKQMGIEVWIFEEGYIRPNFITFEKDGVNANSTLPREKEFYLSQKKFDKDFKFKIFSSTFKNM
AFSSFLYWLFAFLFSWYFNNSLHHRSLKLFDFLPWFCSVYRKNKYKITEKSLNEKILSLKQKYFLAILQVHNDTQLSHHY
KKTTEKFIEEVIISFANHAKAKSYLVFKHHPMDRGYRDYTKLIEDLSLKYNVEGRILYVHDLHLPTLLINARGTIVINST
VGLSALYHNSPLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDAVLHAKFRNYVIYKTQVNGNFFKNTSLD

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=949909 WGQ51_RS01650 WP_263660556.1 299432..300610(+) (kpsS) [Campylobacter lari strain NPRC(S) 01.13900]
ATGAATTTAAGTAAAAAGTTAAAAAAATTTTCTGGTAAAAATGTTTTATTGCTCCAAGGACCTGTGGGTGGATTTTTTCG
TAAAATTGCTACAAAAATTCCAAAAGCTAAGGTTTATAAAGTAAATTTTAATGGCGGAGATTTTTTCTTTTATCCTTTTA
AAAGCATTAACTATACTAAAAGCTTAGCCGAGCTTGAAGACTTTTATAAAAAGCTTTTTGAAGAAAAACAAATTCAAGTT
ATCATTATGTATAATGATTGTAGAAAAGTGCATGAGATAGCCATTAATGTTGCTAAGCAAATGGGTATTGAAGTATGGAT
TTTTGAAGAAGGTTATATAAGACCAAACTTCATTACTTTTGAAAAGGATGGAGTAAATGCAAACTCCACTTTACCAAGAG
AAAAAGAATTTTATCTAAGTCAGAAAAAATTTGATAAAGATTTTAAATTTAAAATTTTCTCAAGCACTTTTAAAAATATG
GCTTTTTCTTCATTTTTATACTGGCTTTTTGCTTTTTTATTTTCTTGGTATTTTAATAATTCTTTACATCATAGAAGTTT
AAAACTATTTGACTTTTTACCTTGGTTTTGCTCAGTATATAGAAAAAATAAATACAAAATCACAGAAAAAAGTTTAAATG
AAAAAATTCTTTCTCTAAAACAAAAGTATTTTTTAGCTATTTTACAAGTGCATAATGATACTCAACTCTCCCATCATTAT
AAAAAAACTACAGAAAAATTTATAGAAGAGGTGATTATCTCTTTTGCTAATCATGCCAAAGCAAAGTCATACCTAGTTTT
TAAACACCATCCTATGGATCGTGGCTATAGGGACTATACTAAACTTATAGAAGATTTGAGCTTAAAATACAATGTCGAGG
GTAGAATTTTATATGTACATGACTTACACTTACCTACGCTCTTAATCAATGCAAGAGGCACTATAGTGATAAATAGCACA
GTAGGACTTTCTGCTTTATATCATAATAGCCCTTTAAAAGTTATGGGAAAAGCCTTTTATGATATTGAAGGTTTGACTTA
TCAAAAAAGCTTGCATACTTTTTGGAAAGAATGCAGAGCATATAAACCTGATGCGGTTTTACATGCTAAATTTAGAAATT
ATGTGATATATAAAACCCAAGTCAATGGGAATTTTTTCAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(80-386)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.532

100

0.63