Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | ACHGPQ_RS14845 | Genome accession | NZ_CP171856 |
| Coordinates | 3146171..3146791 (+) | Length | 206 a.a. |
| NCBI ID | WP_011002444.1 | Uniprot ID | Q8XWE6 |
| Organism | Ralstonia pseudosolanacearum strain NIB_Z_3685 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3141171..3151791
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACHGPQ_RS14835 (ACHGPQ_14835) | sodB | 3142407..3142985 (-) | 579 | WP_028853552.1 | superoxide dismutase [Fe] | - |
| ACHGPQ_RS14840 (ACHGPQ_14840) | xseA | 3143131..3144546 (-) | 1416 | WP_197383736.1 | exodeoxyribonuclease VII large subunit | - |
| ACHGPQ_RS14845 (ACHGPQ_14845) | exbB | 3146171..3146791 (+) | 621 | WP_011002444.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| ACHGPQ_RS14850 (ACHGPQ_14850) | - | 3146814..3147245 (+) | 432 | WP_011002445.1 | ExbD/TolR family protein | - |
| ACHGPQ_RS14855 (ACHGPQ_14855) | lpxK | 3147261..3148310 (+) | 1050 | WP_197369494.1 | tetraacyldisaccharide 4'-kinase | - |
| ACHGPQ_RS14860 (ACHGPQ_14860) | - | 3148371..3148559 (+) | 189 | WP_003266270.1 | Trm112 family protein | - |
| ACHGPQ_RS14865 (ACHGPQ_14865) | kdsB | 3148578..3149384 (+) | 807 | WP_011002447.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACHGPQ_RS14870 (ACHGPQ_14870) | adk | 3149704..3150372 (+) | 669 | WP_011002448.1 | adenylate kinase | - |
| ACHGPQ_RS14875 (ACHGPQ_14875) | - | 3150537..3151295 (+) | 759 | WP_019718335.1 | 3-hydroxyacyl-CoA dehydrogenase | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 22288.15 Da Isoelectric Point: 9.3208
>NTDB_id=949384 ACHGPQ_RS14845 WP_011002444.1 3146171..3146791(+) (exbB) [Ralstonia pseudosolanacearum strain NIB_Z_3685]
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
MFSIIQAAGWPIWPLLIASVLALALIIERFVALQRKKIIPPKVYDEALAVAHQRKATPEVVNTLEQGSPLGRVLAAALRH
VVLHPATTREAAKEVVEEAGQNVAHRLERYLNALGTIASVAPLMGLFGTVVGMIEIFGSQTAAGTNPQTLAHGISVALYN
TALGLVVAIPTLIFWRYFRGVVDSYVVELEHLSATYLDAILPPRRG
Nucleotide
Download Length: 621 bp
>NTDB_id=949384 ACHGPQ_RS14845 WP_011002444.1 3146171..3146791(+) (exbB) [Ralstonia pseudosolanacearum strain NIB_Z_3685]
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCGGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGTCAGAACGTCGCCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
GTGTTTTCCATCATCCAAGCCGCCGGCTGGCCGATCTGGCCGCTGCTGATTGCCTCGGTGCTCGCCCTGGCGCTCATCAT
CGAACGCTTCGTCGCCTTGCAGCGCAAGAAGATCATTCCTCCCAAGGTGTATGACGAGGCCCTGGCGGTGGCACACCAGC
GCAAGGCGACGCCGGAAGTCGTGAACACGCTGGAACAGGGCTCGCCGCTGGGCCGCGTGCTGGCCGCCGCACTGCGCCAC
GTGGTGCTGCATCCGGCCACCACGCGCGAAGCCGCCAAGGAAGTGGTGGAAGAAGCCGGTCAGAACGTCGCCCACCGCCT
GGAGCGCTACCTGAACGCACTCGGCACCATCGCCTCGGTGGCGCCGCTGATGGGTCTGTTCGGCACCGTGGTCGGCATGA
TCGAGATCTTCGGCAGCCAGACCGCCGCCGGCACCAACCCGCAGACGCTCGCGCACGGCATCTCGGTCGCGCTGTACAAC
ACGGCGCTGGGCCTGGTGGTGGCCATCCCGACGCTGATCTTCTGGCGCTACTTCCGTGGCGTGGTCGACAGCTACGTGGT
CGAACTCGAGCACCTGTCCGCCACGTACCTCGACGCGATCCTGCCGCCGCGGCGCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
40.488 |
99.515 |
0.403 |