Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WFE12_RS07870 Genome accession   NZ_CP147877
Coordinates   1495202..1495777 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1490202..1500777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS07840 dapD 1490388..1491098 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WFE12_RS07845 dapI 1491168..1492292 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WFE12_RS07850 ykuS 1492354..1492599 (+) 246 WP_003232382.1 YkuS family protein -
  WFE12_RS07855 mscT 1492636..1493439 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WFE12_RS07860 ahpA 1493676..1494218 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WFE12_RS07865 ykuV 1494290..1494736 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WFE12_RS07870 rok 1495202..1495777 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WFE12_RS07875 cse15 1495818..1496783 (-) 966 WP_003245018.1 spore protein Cse15 -
  WFE12_RS07880 mobA 1496920..1497519 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WFE12_RS07885 moeB 1497570..1498589 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WFE12_RS07890 glp 1498607..1499899 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WFE12_RS07895 mobB 1499860..1500381 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=949136 WFE12_RS07870 WP_003232378.1 1495202..1495777(+) (rok) [Bacillus subtilis subsp. subtilis str. 168]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=949136 WFE12_RS07870 WP_003232378.1 1495202..1495777(+) (rok) [Bacillus subtilis subsp. subtilis str. 168]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1