Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WFE12_RS06265 Genome accession   NZ_CP147877
Coordinates   1209009..1209200 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204009..1214200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS06235 argF 1204873..1205832 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  WFE12_RS06240 yjzC 1205918..1206097 (+) 180 WP_003245356.1 YjzC family protein -
  WFE12_RS06245 yjzD 1206143..1206328 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  WFE12_RS06250 - 1206577..1207311 (+) 735 WP_003245223.1 hypothetical protein -
  WFE12_RS06255 - 1207393..1207950 (+) 558 WP_003232974.1 hypothetical protein -
  WFE12_RS06260 med 1208041..1208994 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  WFE12_RS06265 comZ 1209009..1209200 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  WFE12_RS06270 yjzB 1209230..1209469 (-) 240 WP_003232972.1 spore coat protein YjzB -
  WFE12_RS06275 fabH 1209634..1210572 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  WFE12_RS06280 fabF 1210595..1211836 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  WFE12_RS06285 yjaZ 1211912..1212697 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  WFE12_RS06290 appD 1212889..1213875 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=949127 WFE12_RS06265 WP_003224559.1 1209009..1209200(+) (comZ) [Bacillus subtilis subsp. subtilis str. 168]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=949127 WFE12_RS06265 WP_003224559.1 1209009..1209200(+) (comZ) [Bacillus subtilis subsp. subtilis str. 168]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1