Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WFE12_RS04740 Genome accession   NZ_CP147877
Coordinates   927049..927843 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 922049..932843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS04710 sxzA 922888..923919 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  WFE12_RS04715 yfhB 924034..924915 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  WFE12_RS04720 yfhC 925003..925587 (+) 585 WP_003243940.1 nitroreductase -
  WFE12_RS04725 yfhD 925626..925817 (-) 192 WP_003233561.1 YfhD family protein -
  WFE12_RS04730 yfhE 925884..925994 (-) 111 WP_003223230.1 YfhE family protein -
  WFE12_RS04735 yfhF 926049..926960 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  WFE12_RS04740 recX 927049..927843 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  WFE12_RS04745 yfhH 927845..928159 (+) 315 WP_003244592.1 YfhH family protein -
  WFE12_RS04750 yfhI 928302..929495 (+) 1194 WP_003243500.1 MFS transporter -
  WFE12_RS04755 sspK 929528..929680 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WFE12_RS04760 yfhJ 929805..930074 (+) 270 WP_003243789.1 YfhJ family protein -
  WFE12_RS04765 yfhK 930219..930737 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WFE12_RS04770 spdL 930822..931154 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  WFE12_RS04775 ephM 931141..932001 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=949118 WFE12_RS04740 WP_003243354.1 927049..927843(+) (recX) [Bacillus subtilis subsp. subtilis str. 168]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=949118 WFE12_RS04740 WP_003243354.1 927049..927843(+) (recX) [Bacillus subtilis subsp. subtilis str. 168]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1