Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   WFE12_RS02205 Genome accession   NZ_CP147877
Coordinates   433791..434741 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 428791..439741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS02180 rapC 430250..431398 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  WFE12_RS02185 phrC 431382..431504 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  WFE12_RS02190 yczM 431604..431693 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  WFE12_RS02195 yczN 431775..431888 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  WFE12_RS02200 thrD 432042..433406 (-) 1365 WP_009966541.1 aspartate kinase -
  WFE12_RS02205 ceuB 433791..434741 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  WFE12_RS02210 yclO 434734..435681 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  WFE12_RS02215 yclP 435675..436433 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  WFE12_RS02220 yclQ 436455..437408 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  WFE12_RS02225 ycnB 437455..438873 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=949111 WFE12_RS02205 WP_003234491.1 433791..434741(+) (ceuB) [Bacillus subtilis subsp. subtilis str. 168]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=949111 WFE12_RS02205 WP_003234491.1 433791..434741(+) (ceuB) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522